DNA sequences - Sarment
Sarment is a source package of object-oriented Python modules for sequence segmentation via HMM analysis and Maximal Predictive Partitioning.
It provides several classes:
data classes to store data such as sequences and vectors,
count classes to compute counts and proportions of words on sequences,
partition classes to handle partitions and partitionings,
Lexique class to compute partitions, either by HMM methods or maximal partitioning.