Sequence format conversion - ReadSeq
READSEQ will read in formatted sequence files and convert the sequence information in the files into another file that has a different format. Readseq is particularly useful as it automatically detects many sequence formats, and interconverts among them.
Formats which readseq understands:
IG/Stanford, used by Intelligenetics and others
GenBank/GB, genbank flatfile format
NBRF format
EMBL, EMBL flatfile format
GCG, single sequence format of GCG software
DNAStrider, for common Mac program
Fitch format, limited use
Pearson/Fasta, a common format used by Fasta programs and others
Zuker format, limited use. Input only.
Olsen, format printed by Olsen VMS sequence editor. Input only.
Phylip3.2, sequential format for Phylip programs
Phylip, interleaved format for Phylip programs (v3.3, v3.4)
Plain/Raw, sequence data only (no name, document, numbering)
MSF multi sequence format used by GCG software
PAUP’s multiple sequence (NEXUS) format
PIR/CODATA format used by PIR
ASN.1 format used by NCBI
etc.
Pretty print with various options for nice looking output. Output only.
You can use readseq online :
in Lille
at Pasteur Paris